Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901904.1_cds_XP_016451952.1_46243
CDS Infomation

[gene=LOC107776548] [db_xref=GeneID:107776548] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016451952.1] [location=join(24925..25839,25982..26596)] [gbkey=CDS]
Sequence

ATGGAGGCAAAACACTTATCATTCATCTTCATTTCAGTCTTGATATTCGTTTCCTTCATC
ATTCGTTTATTTCAGATATGGAAGGCATCAAAAACCTTTAACAAACTATTGCCTCCAGGG
CCATGGAGTCTACCTTTGATTGGGAACTTGCACCTATTAATGAATGGCCGCCTTCCAGTA
CATCATACTTTCAGAAGTCTATCGCGAAGATATGGGCCAATCTTTCACTTACGTCTTGGA
GAAATATCGATCATTGTTGTATCTTCACCTGAGATGGCAAAAGAAATTATGAAAACTCAA
GACCTTCGCTTTGCTACTAGGCCTGAATTTATGTCTGGAGACATTATTTTCTACAACTAC
ACAGACATTATAACTTGTCCATATGGTGATCACTGGAGAAATATGCGCAAAGTGTGCATC
GTGGAACTTCTTAGTGCAAAGATGGTCAAGTCATTTAATTCAATTCGACAAGCAGAGATG
TCAAGTCTCATTTCATCCATTAACTCCATGCCTGATGACTCATTGATCAACTTATCAGAT
AAAATGTTTTGGTTTACAAGTTCTGTAACTTGTAGGTCAGCTTTCGGGAAAGTGATTCAT
GATCAACATAAGTTGATAATGTTGGTGAAGGACATAGCATCATTAGCTGCAGGATTTGAC
TTGGCTGATATGTTCCCTTCCCGAAAGTGGCTTCACAAGATTACTGGATTGAAGTCCAAA
ATGTTGAAGGTTCACACAAAGGTAGATGCAATTTTGGAGAATATCATTAATGAGCATCGG
GAAAGTCGAACTAACGGTAAGAAGGGCAATGGTGAGACTGGAGGTGAAGATTTGATCGAT
GTTCTACTTCGAGTCATGGAGAGTGGCGAATTGGGAACTCCACTCACAAAGAAGAATATC
AAAGGTGTTATTTTTGACATGTTCTTAGCAGGAGCTGAAACCTCATCTACAACAATTATT
TGGGCGTTGGCTGAAATGATAAGAAATCCAAGTGTTATGGCTAAAGCACAACTTGAAGTT
AGAGAAGTCCTAAAAGGAAAGAGAACATTTGAGGATATTGATCTAGAAGAGTTGAAGTAT
CTAAACCTAGTGATTAAAGAAACATTAAGGTTGCACCCTCCTGTTCCTCTATTACTCCCT
AGGGAATGCAGAGAAGAAACAAAAATTGACAAATATACAATACCTATCAAAACTAGAGTT
CTGGTGAATGTATGGGCAATGGGAAGAGAGTCTAAATATTGGCATAATCCAGAAAGTTTT
ATACCTGAGAGATTTGAGAATAATTCTATTGATTTCAAAGGAAACCACTTTGAATTTATT
CCGTTTGGTGCAGGACGAAGAATATGTCCAGGATTATTATTCGGTTTAGTTAATGTAGGA
CATCCTTTAGCTCAATTGCTTTATCACTACGACTGGAAGACTCCTCCTGGGATAACTCCA
GACAATTTAGATATGACCGAAACAATTGGGGTAGCTGGCGGAAGAAAGGATGATCTTTGT
TTAATTGTTACTCCTTTTGGTCTCTCTTAA

Peptide Sequence

PEP ID

XP_016451952.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEAKHLSFIFISVLIFVSFIIRLFQIWKASKTFNKLLPPGPWSLPLIGNLHLLMNGRLPV
HHTFRSLSRRYGPIFHLRLGEISIIVVSSPEMAKEIMKTQDLRFATRPEFMSGDIIFYNY
TDIITCPYGDHWRNMRKVCIVELLSAKMVKSFNSIRQAEMSSLISSINSMPDDSLINLSD
KMFWFTSSVTCRSAFGKVIHDQHKLIMLVKDIASLAAGFDLADMFPSRKWLHKITGLKSK
MLKVHTKVDAILENIINEHRESRTNGKKGNGETGGEDLIDVLLRVMESGELGTPLTKKNI
KGVIFDMFLAGAETSSTTIIWALAEMIRNPSVMAKAQLEVREVLKGKRTFEDIDLEELKY
LNLVIKETLRLHPPVPLLLPRECREETKIDKYTIPIKTRVLVNVWAMGRESKYWHNPESF
IPERFENNSIDFKGNHFEFIPFGAGRRICPGLLFGLVNVGHPLAQLLYHYDWKTPPGITP
DNLDMTETIGVAGGRKDDLCLIVTPFGLS

Transcript Sequence

Gene sequence data has not been registered.